The Mesozoic basins in Yanshan, China underwent several important tectonic transformations, including changes from a pre-Late Triassic marginal cratonic basin to a Late Triassic-Late Jurassic flexural basin and then to a late Late Jurassic-Early Cretaceous rift basin. In response to two violent intraplate deformation at Late Triassic and Late Jurassic, coarse fluvial depositional systems in Xingshikou and Tuchengzi Formations were deposited in front of thrust belts. Controlled by transform and extension faulting, fan deltas and lacustrine systems were deposited in Early Cretaceous basins. The composition of clastic debris in Late Triassic and Late Jurassic flexural basins respectively represents unroofing processes from Proterozoic to Archean and from early deposited, overlying pyroclastic rocks to basement rocks in provenance areas. Restored protobasins were gradually migrated toward nearly NEE to EW-trending from Early Jurassic to early Late Jurassic. The Early Cretaceous basins with a NNE-trending crossed over early-formed basins. The Early-Late Jurassic and Early Cretaceous basins were respectively controlled by different tectonic mechanisms.